title

indexPeople

PP2017   NP2017   TPC2017   FB2011 

2018

Wang, Y. and Jiao, Y. (2018) Axillary meristem initiation — a way to branch out. Curr. Opin. Plant Biol. 41: 61-66.
Pubmed | DOI | PDF


2017

Shi, J., Dong, J., Xue, J., Wang, H., Yang, Z.-N., Jiao, Y., Xu, L. and Huang H. (2017) Model for the role of auxin polar transport in patterning of the leaf adaxial-abaxial axis. Plant J. 92: 469-480.
Pubmed | DOI | PDF

Han, Y.*, Chu, X.*, Yu, H., Ma, Y.-K., Wang, X.-J., Qian, W. and Jiao, Y. (2017) Single-cell transcriptome analysis reveals widespread monoallelic gene expression in individual rice mesophyll cells. Sci. Bull. 62: 1304-1314.
DOI | PDF

Guan, C., Wu, B., Yu, T., Wang, Q., Krogan, N.T., Liu, X. and Jiao, Y. (2017) Spatial auxin signaling controls leaf flattening in Arabidopsis. Curr. Biol. 27: 2940-2950.
Pubmed | DOI | PDF | F1000Prime

Wang, Y. and Jiao, Y. (2017) Auxin and above ground meristems. J. Exp. Bot. doi: 10.1093/jxb/erx299.
Pubmed | DOI | PDF

Wang, Y.*, Yu, H.*, Tian, C., Sajjad, M., Gao, C., Tong, Y., Wang, X. and Jiao, Y. (2017) Transcriptome association identifies regulators of wheat spike architecture. Plant Physiol. 175: 746-757.
Pubmed | DOI | PDF | Cover

Qi, J.*, Wu, B.*, Feng, S.*, Lü, S., Guan, C., Zhang, X., Qiu, D., Hu, Y., Zhou, Y., Li, C., Long, M. and Jiao, Y. (2017) Mechanical regulation of organ asymmetry in leaves. Nat. Plants 3: 724-733.
Pubmed | DOI | PDF | Cover

Wang, J., Tian, C., Zhang, C., Shi, B., Cao, X., Zhang, T.-Q., Zhao, Z., Wang, J.-W. and Jiao, Y. (2017) Cytokinin signaling activates WUSCHEL expression during axillary meristem initiation. Plant Cell 29: 1374-1387.
Pubmed | DOI | PDF | Commentary | Cover

Zhang, T.-Q., Lian, H., Zhou, C.-M., Xu, L., Jiao, Y. and Wang, J.-W. (2017) A two-step model for de novo activation of WUSCHEL during plant shoot regeneration. Plant Cell 29: 1073-1087.
Pubmed | DOI | PDF | Commentary


2016

Jiao, Y.*, Hamant, O.*, Ding, Z.* and Zhang, X.S. (2016) Meristem biology flourishes under Mt. Tai.  Mol. Plant 9: 1224-1227.
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Li, S., Yu, H., Dong, J., Che, X., Jiao, Y. and Liu, D. (2016) The molecular mechanism of ethylene-mediated root hair development induced by phosphate starvation. PLoS Genet. 12: e1006194.
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Shi, B.*, Zhang, C.*, Tian, C., Wang, J., Wang, Q., Xu, T., Xu, Y., Ohno, C., Sablowski, R., Heisler, M.G., Theres, K., Wang, Y. and Jiao, Y. (2016) Two-step regulation of a meristematic cell population acting in shoot branching in Arabidopsis. PLoS Genet. 12: e1006168.
Pubmed | DOI | PDF

Yu, H.*, Tian, C.*, Yu, Y. and Jiao, Y. (2016) Transcriptome survey of the contribution of alternative splicing to proteome diversity in Arabidopsis thaliana. Mol. Plant 9: 749-752.
Pubmed | DOI | PDF | Genome Browser

Jiao, Y. (2016) Trichome formation: Gibberellins on the move. Plant Physiol. 170: 1174-1175.
Pubmed | DOI | PDF

Yang, M. and Jiao, Y. (2016) Regulation of axillary meristem initiation by transcription factors and plant hormones. Front. Plant Sci. 7: 183.
Pubmed | DOI | PDF


2015

Han, Y. and Jiao, Y. (2015) APETALA1 establishes determinate floral meristem through regulating cytokinins homeostasis in Arabidopsis. Plant Signal Behav. 10: e989039.
Pubmed | DOI | PDF

Tian, C. and Jiao, Y. (2015) A systems approach to understand shoot branching. Curr. Plant Biol. 3-4: 13-19.
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2014

Qi, J.*, Wang, Y.*, Yu, T., Cunha, A., Wu, B., Vernoux, T., Meyerowitz, E.M. and Jiao, Y. (2014) Auxin depletion from leaf primordia contributes to organ patterning. Proc. Natl Acad. Sci. USA 111: 18769-18774.
Pubmed | DOI | PDF | Commentary | Germplasms

Han, Y.*, Yang, H.* and Jiao, Y. (2014) Regulation of inflorescence architecture by cytokinins. Front. Plant Sci. 5: 669.
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Tian, C., Zhang, X, He, J., Yu, H., Wang, Y., Shi, B., Han, Y., Wang, G., Feng, X., Zhang, C., Wang, J., Qi, J., Yu, R. and Jiao, Y. (2014) An organ boundary-enriched gene regulatory network uncovers regulatory hierarchies underlying axillary meristem initiation. Mol. Syst. Biol. 10: 755.
Pubmed | DOI | PDF | Germplasms

Liu, X., Dinh, T., Li, D., Shi, B., Li, Y., Cao, X., Guo, L., Pan, Y., Jiao, Y. and Chen, X. (2014) AUXIN RESPONSE FACTOR 3 integrates the functions of AGAMOUS and APETALA2 in floral meristem determinacy. Plant J. 80: 629-641.
Pubmed | DOI | PDF | F1000Prime

Kang, J., Yu, H., Tian, C., Zhou, W., Li, C., Jiao, Y. and Liu, D. (2014) Suppression of photosynthetic gene expression in roots is required for sustained root growth under phosphate deficiency. Plant Physiol. 165: 1156-1170.
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Wang, Y., Wang, J., Shi, B., Yu, T., Qi, J., Meyerowitz, E.M. and Jiao, Y. (2014) The stem cell niche in leaf axils is established by auxin and cytokinin in Arabidopsis. Plant Cell 26: 2055-2067.
Pubmed | DOI | PDF | Commentary | F1000Prime | Germplasms

Han, Y., Zhang, C., Yang, H. and Jiao, Y. (2014) Cytokinin pathway mediates APETALA1 function in the establishment of determinate floral meristem in Arabidopsis. Proc. Natl Acad. Sci. USA 111: 6840-6845.
Pubmed | DOI | PDF | Germplasms

Wang, Y. and Jiao, Y. (2014) Insights on plant development using NGS technologies. In: Next-generation Sequencing: Current Technologies and Applications, J. Xu, ed., Caister Academic, pp. 121-130.
Publisher Webpage | PDF

He, J. and Jiao, Y. (2014) Next-generation sequencing applied to flower development: RNA-seq. Methods Mol. Biol. 1110: 401-411.
Pubmed | DOI | PDF

Wang, Y. and Jiao, Y. (2014) Translating ribosome affinity purification (TRAP) for cell-specific translation profiling in developing flowers. Methods Mol. Biol. 1110: 323-328.
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Wellmer, F., Bowman, J.L., Davies, B., Ferrándiz, C., Fletcher, J.C., Franks, R.G., Graciet, E., Gregis, V., Ito, T., Jack, T.P., Jiao, Y., Kater, M.M., Ma, H., Meyerowitz, E.M., Prunet, N. and Riechmann, J.L. (2014) Flower development: open questions and future directions. Methods Mol. Biol. 1110: 103-124.
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2012

Wang, X., Wu, F., Xie, Q., Wang, H., Wang, Y., Yue, Y., Gahura, O., Ma, S., Liu, L., Cao, Y., Jiao, Y., Puta, F., McClung, C.R., Xu, X. and Ma, L. (2012) SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis. Plant Cell 24: 3278-3295.
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Jiao, Y. and Riechmann, J.L. (2012) Genome-wide profiling of uncapped mRNA. Methods Mol. Biol. 876: 207-216.
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2011

Jin, Y., Luo, Q., Tong, H., Wang, A., Cheng, Z., Tang, J., Li, D., Zhao, X., Li, X., Wan, J., Jiao, Y., Chu, C. and Zhu, L. (2011) An AT-hook gene is required for palea formation and floral organ number control in rice. Dev. Biol. 359: 277-288.
Pubmed | DOI | PDF

Wang, Y. and Jiao, Y. (2011) Advances in plant cell type-specific genome-wide studies of gene expression. Front. Biol. 6: 384-389.
DOI | PDF | Cover


Prior to 2011

Jiao, Y. and Meyerowitz, E.M. (2010) Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control. Mol. Syst. Biol. 6: 419.
Pubmed | DOI | PDF | Germplasms

Sugimoto, K., Jiao, Y. and Meyerowitz, E.M. (2010) Arabidopsis regeneration from multiple tissues occurs via a root development pathway. Dev. Cell 18: 463-471.
Pubmed | DOI | PDF | F1000Prime

Jiao, Y., Tausta, S.L., Gandotra, N., Sun, N., Liu, T., Clay, N.K., Ceserani, T., Chen, M., Ma, L., Holford, M., Zhang, H.-y., Zhao, H., Deng, X.-W. and Nelson, T. (2009) A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies. Nat. Genet. 41: 258-263.
Pubmed | DOI | PDF | F1000Prime

Jiao, Y., Riechmann, J.L. and Meyerowitz, E.M. (2008) Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation. Plant Cell 20: 2571-2585.
Pubmed | DOI | PDF | Commentary | F1000Prime

Nelson, T., Tausta, S.L., Gandotra, N., Liu, T., Ceserani, T., Chen, M., Jiao, Y., Ma, L., Deng, X.-W., Sun, N., Holfold, M., Li, N. and Zhao, H. (2008) The promise of systems biology for deciphering the control of C4 leaf development: transcriptome profiling of leaf cell types. In: Charting New Pathways To C4 Rice, J.E. Sheehy, P.L. Mitchell and B. Hardy, eds., World Scientific, pp. 317-332.
Publisher Webpage | PDF

Jiao, Y., Lau, O.S. and Deng, X.W. (2007) Light-regulated transcriptional networks in higher plants. Nat. Rev. Genet. 8: 217-230.
Pubmed | DOI | PDF

Zhou, J., Wang, X., Jiao, Y., Qin, Y., Liu, X., He, K., Chen, C., Ma, L., Wang, J., Xiong, L., Zhang, Q., Fan, L. and Deng, X.W. (2007) Global genome expression analysis of rice in response to drought and high-salinity stresses in shoot, flag leaf, and panicle. Plant Mol. Biol. 63: 591-608.
Pubmed | DOI | PDF

Jiao, Y. and Deng, X.W. (2007) A genome-wide transcriptional activity survey of rice transposable element-related genes. Genome Biol. 8: R28.
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Su, N., He, K., Jiao, Y., Chen, C., Zhou, J., Li, L., Bai, S., Li, X. and Deng, X.W. (2007) Distinct reorganization of the genome transcription associates with organogenesis of somatic embryo, shoots, and roots in rice. Plant Mol. Biol. 63: 337-349.
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Jiao, Y., Ma, L., Strickland, E. and Deng, X.W. (2005) Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis. Plant Cell 17: 3239-3256.
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Ma, L., Chen, C., Liu, X., Jiao, Y., Su, N., Li, L., Wang, X., Cao, M., Sun, N., Zhang, X., Bao, J., Li, J., Pedersen, S., Bolund, L., Zhao, H., Yuan, L., Wong, G.K., Wang, J., Deng, X.W. and Wang, J. (2005) A microarray analysis of the rice transcriptome and its comparison to Arabidopsis. Genome Res. 15: 1274-1283.
Pubmed | DOI | PDF | F1000Prime

Jiao, Y., Jia, P., Wang, X., Su, N., Yu, S., Zhang, D., Ma, L., Feng, Q., Jin, Z., Li, L., Xue, Y., Cheng, Z., Zhao, H., Han, B. and Deng, X.W. (2005) A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription. Plant Cell 17: 1641-1657.
Pubmed | DOI | PDF | Cover

Ma, L., Sun, N., Liu, X., Jiao, Y., Zhao, H. and Deng, X.W. (2005) Organ-specific expression of Arabidopsis genome during development. Plant Physiol. 138: 80-91.
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Jiao, Y., Yang, H., Ma, L., Sun, N., Yu, H., Liu, T., Gao, Y., Gu, H., Chen, Z., Wada, M., Gerstein, M., Zhao, H., Qu, L.-J. and Deng, X.W. (2003) A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. Plant Physiol. 133: 1480-1493.
Pubmed | DOI | PDF | Erratum